GarnierStahlLaporteEtAl2017

Référence

Garnier, E., Stahl, U., Laporte, M.-A., Kattge, J., Mougenot, I., Kuhn, I., Laporte, B., Amiaud, B., Ahrestani, F.S., Bonisch, G., Bunker, D.E., Cornelissen, J.H.C., Diaz, S., Enquist, B.J., Gachet, S., Jaureguiberry, P., Kleyer, M., Lavorel, S., Maicher, L., Perez-Harguindeguy, N., Poorter, H., Schildhauer, M., Shipley, B., Violle, C., Weiher, E., Wirth, C., Wright, I.J., Klotz, S. (2017) Towards a thesaurus of plant characteristics: an ecological contribution. Journal of Ecology, 105(2):298-309. (Scopus )

Résumé

Ecological research produces a tremendous amount of data, but the diversity in scales and topics covered and the ways in which studies are carried out result in large numbers of small, idiosyncratic data sets using heterogeneous terminologies. Such heterogeneity can be attributed, in part, to a lack of standards for acquiring, organizing and describing data. Here, we propose a terminological resource, a Thesaurus Of Plant characteristics (TOP), whose aim is to harmonize and formalize concepts for plant characteristics widely used in ecology. TOP concentrates on two types of plant characteristics: traits and environmental associations. It builds on previous initiatives for several aspects: (i) characteristics are designed following the entity-quality (EQ) model (a characteristic is modelled as the ‘Quality’ <Q> of an ‘Entity’ <E>) used in the context of Open Biological Ontologies; (ii) whenever possible, the Entities and Qualities are taken from existing terminology standards, mainly the Plant Ontology (PO) and Phenotypic Quality Ontology (PATO) ontologies; and (iii) whenever a characteristic already has a definition, if appropriate, it is reused and referenced. The development of TOP, which complies with semantic web principles, was carried out through the involvement of experts from both the ecology and the semantics research communities. Regular updates of TOP are planned, based on community feedback and involvement. TOP provides names, definitions, units, synonyms and related terms for about 850 plant characteristics. TOP is available online (www.top-thesaurus.org), and can be browsed using an alphabetical list of characteristics, a hierarchical tree of characteristics, a faceted and a free-text search, and through an Application Programming Interface. Synthesis. Harmonizing definitions of concepts, as proposed by TOP, forms the basis for better integration of data across heterogeneous data sets and terminologies, thereby increasing the potential for data reuse. It also allows enhanced scientific synthesis. TOP therefore has the potential to improve research and communication not only within the field of ecology, but also in related fields with interest in plant functioning and distribution. © 2016 The Authors. Journal of Ecology © 2016 British Ecological Society

Format EndNote

Vous pouvez importer cette référence dans EndNote.

Format BibTeX-CSV

Vous pouvez importer cette référence en format BibTeX-CSV.

Format BibTeX

Vous pouvez copier l'entrée BibTeX de cette référence ci-bas, ou l'importer directement dans un logiciel tel que JabRef .

@ARTICLE { GarnierStahlLaporteEtAl2017,
    AUTHOR = { Garnier, E. and Stahl, U. and Laporte, M.-A. and Kattge, J. and Mougenot, I. and Kuhn, I. and Laporte, B. and Amiaud, B. and Ahrestani, F.S. and Bonisch, G. and Bunker, D.E. and Cornelissen, J.H.C. and Diaz, S. and Enquist, B.J. and Gachet, S. and Jaureguiberry, P. and Kleyer, M. and Lavorel, S. and Maicher, L. and Perez-Harguindeguy, N. and Poorter, H. and Schildhauer, M. and Shipley, B. and Violle, C. and Weiher, E. and Wirth, C. and Wright, I.J. and Klotz, S. },
    TITLE = { Towards a thesaurus of plant characteristics: an ecological contribution },
    JOURNAL = { Journal of Ecology },
    YEAR = { 2017 },
    VOLUME = { 105 },
    NUMBER = { 2 },
    PAGES = { 298-309 },
    NOTE = { cited By 3 },
    ABSTRACT = { Ecological research produces a tremendous amount of data, but the diversity in scales and topics covered and the ways in which studies are carried out result in large numbers of small, idiosyncratic data sets using heterogeneous terminologies. Such heterogeneity can be attributed, in part, to a lack of standards for acquiring, organizing and describing data. Here, we propose a terminological resource, a Thesaurus Of Plant characteristics (TOP), whose aim is to harmonize and formalize concepts for plant characteristics widely used in ecology. TOP concentrates on two types of plant characteristics: traits and environmental associations. It builds on previous initiatives for several aspects: (i) characteristics are designed following the entity-quality (EQ) model (a characteristic is modelled as the ‘Quality’ <Q> of an ‘Entity’ <E>) used in the context of Open Biological Ontologies; (ii) whenever possible, the Entities and Qualities are taken from existing terminology standards, mainly the Plant Ontology (PO) and Phenotypic Quality Ontology (PATO) ontologies; and (iii) whenever a characteristic already has a definition, if appropriate, it is reused and referenced. The development of TOP, which complies with semantic web principles, was carried out through the involvement of experts from both the ecology and the semantics research communities. Regular updates of TOP are planned, based on community feedback and involvement. TOP provides names, definitions, units, synonyms and related terms for about 850 plant characteristics. TOP is available online (www.top-thesaurus.org), and can be browsed using an alphabetical list of characteristics, a hierarchical tree of characteristics, a faceted and a free-text search, and through an Application Programming Interface. Synthesis. Harmonizing definitions of concepts, as proposed by TOP, forms the basis for better integration of data across heterogeneous data sets and terminologies, thereby increasing the potential for data reuse. It also allows enhanced scientific synthesis. TOP therefore has the potential to improve research and communication not only within the field of ecology, but also in related fields with interest in plant functioning and distribution. © 2016 The Authors. Journal of Ecology © 2016 British Ecological Society },
    AFFILIATION = { Centre d'Ecologie Fonctionnelle et Evolutive (UMR 5175), CNRS – Université de Montpellier – Université Paul-Valéry Montpellier – EPHE, Montpellier Cedex 5, France; CEntre for the Synthesis and Analysis of Biodiversity (CESAB-FRB), Aix-en-Provence, France; Max-Planck-Institute for Biogeochemistry, Hans-Knöll-Straße 10, Jena, Germany; German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5e, Leipzig, Germany; Department of Community Ecology, Helmholtz Centre for Environmental Research – UFZ, Theodor-Lieser-Str. 4, Halle, Germany; Bioversity International, via dei Tre Denari, 174/a Maccarese, Rome, Italy; UMR 228 ESPACE-DEV, Maison de la Télédétection, Montpellier, France; Martin-Luther-University Halle-Wittenberg (MLU), Geobotany and Botanical Garden, Am Kirchtor 1, Halle, Germany; UMR 1137, Ecologie et Ecophysiologie Forestière, Université de Lorraine, Vandoeuvre-les-Nancy, France; UMR 1137, Ecologie et Ecophysiologie Forestière, INRA, Champenoux, France; Department of Ecology, Evolution and Environmental Biology, Columbia University, New York, NY, United States; Frontier Wildlife Conservation, Mumbai, India; Department of Biological Sciences, New Jersey Institute of Technology, Newark, NJ, United States; Department of Ecological Science, Vrije Universteit, De Boelelaan 1085, HV Amsterdam, Netherlands; IMBIV (CONICET-UNC) & FCEFyN, Universidad Nacional de Córdoba, Av. Vélez Sarsfield 1611, Córdoba, Argentina; Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ, United States; Institut Méditerranéen de Biodiversité et d'Ecologie marine et continentale (IMBE), Aix Marseille Université, CNRS, IRD, Avignon Université, Campus St-Jérôme Case 421, Marseille, France; Institute of Biology and Environmental Sciences, University of Oldenburg, Oldenburg, Germany; Laboratoire d'Ecologie Alpine (UMR 5553), CNRS – Université Joseph Fourier, Grenoble, France; Computer Science Department, University of Jena, Jena, Germany; Competitive Intelligence Group, Fraunhofer MOEZ, Neumarkt 9-19, Leipzig, Germany; Plant Sciences (IBG-2), Forschungszentrum Jülich GmbH, Jülich, Germany; National Center for Ecological Analysis and Synthesis (NCEAS), UC Santa Barbara, Santa Barbara, CA, United States; Département de biologie, Université de Sherbrooke, Sherbrooke, QC, Canada; Department of Biology, University of Wisconsin, Eau Claire, WI, United States; Institute for Systematic Botany and Functional Biodiversity, University of Leipzig, Johannisallee 21, Leipzig, Germany; Department of Biological Sciences, Macquarie University, Sydney, NSW, Australia },
    AUTHOR_KEYWORDS = { biodiversity; controlled vocabulary; ecology; informatics; ontology; plant characteristics; plant environmental association; plant trait; semantics; thesaurus },
    DOCUMENT_TYPE = { Article },
    DOI = { 10.1111/1365-2745.12698 },
    SOURCE = { Scopus },
    URL = { https://www.scopus.com/inward/record.uri?eid=2-s2.0-85009193734&doi=10.1111%2f1365-2745.12698&partnerID=40&md5=32cd686f12d7094f8ff0a44171aa9fa8 },
}

********************************************************** *************************** FRQNT ************************ **********************************************************

Un regroupement stratégique du

********************************************************** ***************** Facebook Twitter *********************** **********************************************************

Abonnez-vous à
l'Infolettre du CEF!

********************************************************** ***************** Pub - ABC CBA 2020 ****************** **********************************************************

31 mai au 4 juin 2020

********************************************************** ***************** Pub - Symphonies_Boreales ****************** **********************************************************

********************************************************** ***************** Boîte à trucs *************** **********************************************************

CEF-Référence
La référence vedette !

Jérémie Alluard (2016) Les statistiques au moments de la rédaction 

  • Ce document a pour but de guider les étudiants à intégrer de manière appropriée une analyse statistique dans leur rapport de recherche.

Voir les autres...